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Use the search-function of NBTExplorer to find more entries with magicbees.item
Or
Check in this level.dat the seed of your world - create a new world with this seed and replace the old level.dat with the clean one
(make a Backup before)
I actually made an effort to go into NBT Explorer and delete the item directly from my inventory file. It did not work.
Inventory-file? It is stored in level.dat
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